Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903685.1_cds_XP_016453784.1_47876
CDS Infomation

[gene=LOC107778101] [db_xref=GeneID:107778101] [protein=patatin-like protein 3] [protein_id=XP_016453784.1] [location=join(29223..29408,29701..30066,30270..30431,38681..38980,39135..39359)] [gbkey=CDS]
Sequence

ATGGGAAGGTTATTATTCTTAGTTTCACTAACTTTGTTAGTGACCATTCAAGTTGTACAA
CCTCCAATATTTGTTTGTGCTGCTACCAAAGGAAAGAATTTTATAACAGTTTTGAGCATT
GACGGGGGTGGAATCAGAGGCATTATTCCAGGAACCCTTCTTGCCTTTCTTGAATCCAAG
CTTCAGGAGGTTGATGGACGAAATGCAAGGATTATAGACTATTTTGATGTAGTAGCAGGA
ACAAGCACAGGTGGATTAATTACTACTATGCTCACAGCTCCAAACAGAGATAATCGCCCT
TTATATGCAGCTAAAGATATTTCCAACTTCTATATGGAACACTGCCCTCACATCTTTCCC
GCAAACCGCCGTAACAGCTTCGTGCATAGGATATTCAATTTGTTTGGAGGACCAAAGTAC
GATGGCAACTACTTAAGATTGTTGCTTGAATCAATATTAGGCAAACTTACTATGAAGCAG
ACATTGACTCATACTGTCATCCCTGCTTTTGATATCAAGCGCCTTCAACCAATTATCTTC
ACCACTGTTGATGCCAGAGCAAATGTCTCTAAGAATGTTCTATTATCAGACATCTGCCTC
AGTACCTCCGCAGCACCAACCTTTTTTCCGGTACACTATTTTGAGACTAGGGATGCTCAA
GGGAGAATACGCACATTTGATATGATTGACGGAGGTGTGGCTGCAAATAATCCAACACAA
ATGGCAATTACACACATTTCAAAAGAAATCATGAGGGGCAAATTTCAGTATGAAGAGATG
GAAACAATAGACAGCAAGAAGATGTTGGTTCTATCATTAGGCACAGGTATTGGCAAGCAT
CAAGGGTATAACGCAGCCTCGGCATCAAAATGGGGTTTACTTGGTTGGGTTTACAACAAT
GGTCAGACCCCAATATTGGATGTTTATAATGATGCAAGTGCTGATATGGTAGATATACAT
GTTTCAACTATGTTTCAGACACTTCGCAGTGAAAAGAATTACCTCAGAATTCAGGAGGAT
AATTTGATTGGGGATGCTACATCAATGGATATAGCAACCACAAAAAATATGCAGACACTT
GTGCAGATTGGTAACAATCTATTGAAAAAGCCAGTATCAAGGGTCAACTTAGAGACAGGC
CAATATGAACCCGTTCAAGGGGAAGGAACAAATGAAGAAGCTCTAATCCGTTTTGCTAAG
TTGCTTTCACAAGAAAAGAAGCTTCGATACACCAACTGA

Peptide Sequence

PEP ID

XP_016453784.1
PEP Infomation

PREDICTED: patatin-like protein 3 [Nicotiana tabacum]
Sequence

MGRLLFLVSLTLLVTIQVVQPPIFVCAATKGKNFITVLSIDGGGIRGIIPGTLLAFLESK
LQEVDGRNARIIDYFDVVAGTSTGGLITTMLTAPNRDNRPLYAAKDISNFYMEHCPHIFP
ANRRNSFVHRIFNLFGGPKYDGNYLRLLLESILGKLTMKQTLTHTVIPAFDIKRLQPIIF
TTVDARANVSKNVLLSDICLSTSAAPTFFPVHYFETRDAQGRIRTFDMIDGGVAANNPTQ
MAITHISKEIMRGKFQYEEMETIDSKKMLVLSLGTGIGKHQGYNAASASKWGLLGWVYNN
GQTPILDVYNDASADMVDIHVSTMFQTLRSEKNYLRIQEDNLIGDATSMDIATTKNMQTL
VQIGNNLLKKPVSRVNLETGQYEPVQGEGTNEEALIRFAKLLSQEKKLRYTN

Transcript Sequence

Gene sequence data has not been registered.